Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC6A17Solute carrier family 6 member 17. (727 aa)    
Predicted Functional Partners:
TTC4
Tetratricopeptide repeat domain 4.
      
 0.628
PPFIA3
PTPRF interacting protein alpha 3.
   
  
 0.591
SLC12A8
Solute carrier family 12 member 8.
   
  
 0.577
KIFC2
Kinesin family member C2.
      
 0.577
CAMK2G
Calcium/calmodulin dependent protein kinase II gamma.
     
  0.559
SNCA
Synuclein alpha.
    
 
 0.543
STX1B
Syntaxin 1B.
   
 0.538
STX1A
Syntaxin 1A.
   
 0.538
STX3
Syntaxin 3.
    
 0.531
STX2
Syntaxin 2.
    
 0.531
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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