STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RUBCNLRubicon like autophagy enhancer. (660 aa)    
Predicted Functional Partners:
UVRAG
UV radiation resistance associated.
    
 0.937
CWC25
CWC25 spliceosome associated protein homolog.
   
    0.830
C1orf109
Chromosome 1 open reading frame 109.
   
    0.830
PGM2
Phosphoglucomutase 2.
   
    0.830
ACOT11
acyl-CoA thioesterase 11.
   
    0.830
SLCO1A2
Solute carrier organic anion transporter family member 1A2.
   
    0.830
LIX1
Limb and CNS expressed 1.
   
    0.830
ENSCWAP00000029374
annotation not available
   
    0.830
ENSCWAP00000006378
annotation not available
   
   0.826
FTSJ1
FtsJ RNA 2'-O-methyltransferase 1.
   
    0.825
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.