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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBX22T-box transcription factor 22. (521 aa)    
Predicted Functional Partners:
RGS9BP
Regulator of G protein signaling 9 binding protein.
   
    0.799
ENSCWAP00000017660
annotation not available
      
 0.726
TARBP2
TARBP2 subunit of RISC loading complex.
      
 0.678
SLC16A2
Solute carrier family 16 member 2.
      
 0.647
DR1
Down-regulator of transcription 1.
     
 0.643
GABRE
Gamma-aminobutyric acid type A receptor epsilon subunit.
      
 0.623
SHOX2
Short stature homeobox 2.
    
 
 0.622
CLPTM1
CLPTM1 regulator of GABA type A receptor forward trafficking.
      
 0.604
KIF13A
Kinesin family member 13A.
      
 0.601
BARX1
BARX homeobox 1.
   
 
 0.596
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.