Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RFX8RFX family member 8, lacking RFX DNA binding domain. (509 aa)    
Predicted Functional Partners:
RFX7
Regulatory factor X7.
    
 
 0.836
CHEK2
Checkpoint kinase 2.
    
 0.799
ATR
ATR serine/threonine kinase.
    
 
 0.754
RFXAP
Regulatory factor X associated protein.
    
 0.749
BTAF1
B-TFIID TATA-box binding protein associated factor 1.
    
   0.717
TUSC1
Tumor suppressor candidate 1.
      
 0.698
RFX5
Regulatory factor X5.
      
 0.695
ANKRA2
Ankyrin repeat family A member 2.
    
 0.646
LENG1
Leukocyte receptor cluster member 1.
      
 0.646
RFXANK
Regulatory factor X associated ankyrin containing protein.
    
 0.646
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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