Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEMA6ASemaphorin 6A. (1047 aa)    
Predicted Functional Partners:
PLXNA2
Plexin A2.
    
 0.946
PLXNA1
Plexin A1.
    
 0.943
PLXNA4
Plexin A4.
    
 0.926
PLXNA3
Plexin A3.
    
 0.920
NRP1
Neuropilin 1.
    
 0.876
SEMA6C
Semaphorin 6C.
     
  0.866
SEMA6D
Semaphorin 6D.
     
  0.863
PLXNC1
Plexin C1.
    
 0.843
SEMA6B
Semaphorin 6B.
     
  0.839
PLXND1
Plexin D1.
    
 0.816
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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