Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB24RAB24, member RAS oncogene family. (203 aa)    
Predicted Functional Partners:
ENSCWAP00000008565
annotation not available
   
 0.983
GDI2
GDP dissociation inhibitor 2.
    
 0.926
GDI1
GDP dissociation inhibitor 1.
    
 0.926
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
    
 0.900
APPL1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
 
 0.893
APPL2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
    
 
 0.893
VPS16
VPS16 core subunit of CORVET and HOPS complexes.
    
 0.816
VPS18
VPS18 core subunit of CORVET and HOPS complexes.
    
 0.799
RBSN
Rabenosyn, RAB effector.
    
 0.798
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
    
 0.791
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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