STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM4SF5Transmembrane 4 L six family member 5. (196 aa)    
Predicted Functional Partners:
GLYCTK
Glycerate kinase.
      
 0.736
TMCC2
Transmembrane and coiled-coil domain family 2.
      
 0.685
CASTOR1
Cytosolic arginine sensor for mTORC1 subunit 1.
      
 0.647
BMT2
Base methyltransferase of 25S rRNA 2 homolog.
      
 0.625
RSPH9
Radial spoke head component 9.
      
 0.620
FABP1
Fatty acid binding protein 1.
   
    0.604
SLC39A9
Solute carrier family 39 member 9.
      
 0.599
ATP2C2
ATPase secretory pathway Ca2+ transporting 2.
      
 0.597
A1CF
APOBEC1 complementation factor.
   
    0.591
TM4SF20
Transmembrane 4 L six family member 20.
      
 0.562
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.