Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CUL4BCullin 4B. (902 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
   
 0.997
DCAF1
DDB1 and CUL4 associated factor 1.
   
 0.995
RBX1
Ring-box 1.
    
 0.993
DTL
Denticleless E3 ubiquitin protein ligase homolog.
    
 0.985
DDB2
Damage specific DNA binding protein 2.
    
 0.985
DCAF11
DDB1 and CUL4 associated factor 11.
    
 0.984
ERCC8
ERCC excision repair 8, CSA ubiquitin ligase complex subunit.
    
 0.981
CRBN
Cereblon.
    
 0.978
ENSCWAP00000019878
annotation not available
    
 0.976
WDTC1
WD and tetratricopeptide repeats 1.
    
 0.973
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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