close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAP1LC3CMicrotubule associated protein 1 light chain 3 gamma. (136 aa)    
Predicted Functional Partners:
NBR1
NBR1 autophagy cargo receptor.
   
 0.996
ATG3
Autophagy related 3.
   
 0.941
ATG7
Autophagy related 7.
   
 0.929
SQSTM1
Sequestosome 1.
   
 0.918
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.904
ATG4B
Autophagy related 4B cysteine peptidase.
   
 0.903
ATG4A
Autophagy related 4A cysteine peptidase.
   
 0.876
ATG4D
Autophagy related 4D cysteine peptidase.
   
 0.854
ATG4C
Autophagy related 4C cysteine peptidase.
   
 0.854
ATG5
Autophagy related 5.
   
 0.845
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.