STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPDL1Spindle apparatus coiled-coil protein 1. (605 aa)    
Predicted Functional Partners:
PLK1
Polo like kinase 1.
   
 
  0.934
NUDC
Nuclear distribution C, dynein complex regulator.
     
  0.853
CEP55
Centrosomal protein 55.
   
  
 0.841
ENSCWAP00000020963
annotation not available
   
 
 0.781
RPS5
Ribosomal protein S5.
    
   0.771
SF3B3
Splicing factor 3b subunit 3.
    
   0.770
CKAP2L
Cytoskeleton associated protein 2 like.
   
    0.751
DNAAF4
Dynein axonemal assembly factor 4.
    
   0.750
BUB1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 
 0.746
NDC80
NDC80 kinetochore complex component.
   
 
 0.741
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.