Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ITM2AIntegral membrane protein 2A. (263 aa)    
Predicted Functional Partners:
APP
Amyloid beta precursor protein.
   
 
 0.657
APLP2
Amyloid beta precursor like protein 2.
   
 
 0.585
ADNP2
ADNP homeobox 2.
      
 0.584
SLC35A3
Solute carrier family 35 member A3.
      
 0.580
APLP1
Amyloid beta precursor like protein 1.
   
 
 0.576
ATXN2L
Ataxin 2 like.
      
 0.563
ACKR1
Atypical chemokine receptor 1 (Duffy blood group).
      
 0.562
PLP1
Proteolipid protein 1.
    
 
 0.558
GAK
Cyclin G associated kinase.
    
   0.536
RAB14
RAB14, member RAS oncogene family.
   
 
 0.516
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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