STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM41BTransmembrane protein 41B. (291 aa)    
Predicted Functional Partners:
TMEM64
Transmembrane protein 64.
      
 0.866
XPO1
Exportin 1.
    
  0.855
APOB
Apolipoprotein B.
    
 
 0.812
ENSCWAP00000025969
annotation not available
    
   0.795
VMP1
Vacuole membrane protein 1.
    
 
 0.730
GLDC
Glycine decarboxylase.
   
 
  0.672
NADK
NAD kinase.
   
 
  0.670
ENSCWAP00000004955
annotation not available
     
  0.661
C19orf54
Chromosome 19 open reading frame 54.
      
 0.649
PDHB
Pyruvate dehydrogenase E1 beta subunit.
     
 0.634
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.