STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C1orf43Chromosome 1 open reading frame 43. (253 aa)    
Predicted Functional Partners:
KIAA1109
KIAA1109.
    
 
 0.914
EMC7
ER membrane protein complex subunit 7.
      
 0.754
MLF2
Myeloid leukemia factor 2.
   
  
 0.670
PSMB4
Proteasome 20S subunit beta 4.
   
  
 0.611
EDF1
Endothelial differentiation related factor 1.
      
 0.610
CABP2
Calcium binding protein 2.
      
 0.588
CNTN3
Contactin 3.
      
 0.587
VCP
Valosin containing protein.
      
 0.586
AP2M1
Adaptor related protein complex 2 subunit mu 1.
   
  
 0.586
CHMP2A
Charged multivesicular body protein 2A.
      
 0.586
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.