Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DENND5ADENN domain containing 5A. (1288 aa)    
Predicted Functional Partners:
DENND5B
DENN domain containing 5B.
   
   0.973
DENND4C
DENN domain containing 4C.
    
0.944
DENND2B
DENN domain containing 2B.
    
 
 0.850
ENSCWAP00000013502
annotation not available
    
 
 0.849
ENSCWAP00000013541
annotation not available
    
 
 0.849
MADD
MAP kinase activating death domain.
    
 
 0.846
RAB6A
RAB6A, member RAS oncogene family.
    
 
 0.818
RAB6B
RAB6B, member RAS oncogene family.
    
 
 0.818
ENSCWAP00000026187
annotation not available
     
 0.745
VPS26A
VPS26, retromer complex component A.
     
 0.725
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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