STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDK12Cyclin dependent kinase 12. (1491 aa)    
Predicted Functional Partners:
CCNK
Cyclin K.
   
 0.997
CDK9
Cyclin dependent kinase 9.
    
0.973
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
    
 0.963
ENSCWAP00000004852
annotation not available
   
 0.960
CDK7
Cyclin dependent kinase 7.
   
0.949
CCNT1
Cyclin T1.
   
 0.949
CCNT2
Cyclin T2.
   
 0.939
C6orf15
Chromosome 6 open reading frame 15.
    
 0.919
CCNH
Cyclin H.
    
 0.908
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 
 0.893
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.