Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCNE1Cyclin E1. (410 aa)    
Predicted Functional Partners:
CDK2
Cyclin dependent kinase 2.
   
 0.999
CDK4
Cyclin dependent kinase 4.
   
 0.998
CDKN1A
Cyclin dependent kinase inhibitor 1A.
   
 0.997
CDK6
Cyclin dependent kinase 6.
   
 0.997
RB1
RB transcriptional corepressor 1.
   
 0.996
CDK3
Cyclin dependent kinase 3.
   
 0.996
SKP2
S-phase kinase associated protein 2.
   
 0.993
CDKN1B
Cyclin dependent kinase inhibitor 1B.
   
 0.992
ENSCWAP00000018770
annotation not available
   
 0.992
CDC25A
Cell division cycle 25A.
   
 0.991
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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