Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HTR2A5-hydroxytryptamine receptor 2A. (470 aa)    
Predicted Functional Partners:
HTR2C
5-hydroxytryptamine receptor 2C.
   
0.987
HTR2B
5-hydroxytryptamine receptor 2B.
  
0.967
GNA11
G protein subunit alpha 11.
    
 0.934
GNAQ
G protein subunit alpha q.
    
 0.934
GNA14
G protein subunit alpha 14.
    
 0.918
CACNA1D
Calcium voltage-gated channel subunit alpha1 D.
     
 0.900
CACNA1C
Calcium voltage-gated channel subunit alpha1 C.
     
 0.900
CACNA1S
Calcium voltage-gated channel subunit alpha1 S.
     
 0.893
CACNA1F
Calcium voltage-gated channel subunit alpha1 F.
     
 0.890
GNA15
G protein subunit alpha 15.
    
 0.875
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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