STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NEUROD2Neuronal differentiation 2. (382 aa)    
Predicted Functional Partners:
TCF3
Transcription factor 3.
    
 
 0.886
TCF4
Transcription factor 4.
    
 
 0.793
TCF12
Transcription factor 12.
    
 
 0.793
INSM1
INSM transcriptional repressor 1.
   
 0.792
EP300
E1A binding protein p300.
    
 
 0.772
GCK
Glucokinase.
     
 0.709
PAX6
Paired box 6.
   
 0.706
PAX4
Paired box 4.
   
 0.662
NKX2-2
NK2 homeobox 2.
   
 0.661
INSM2
INSM transcriptional repressor 2.
   
 0.649
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.