close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROBO4Roundabout guidance receptor 4. (1009 aa)    
Predicted Functional Partners:
SLIT2
Slit guidance ligand 2.
   
 0.966
SLIT1
Slit guidance ligand 1.
   
 0.948
SLIT3
Slit guidance ligand 3.
   
 0.921
CLDN5
Claudin 5.
   
  
 0.879
NYX
Nyctalopin.
   
 0.869
LRTM2
Leucine rich repeats and transmembrane domains 2.
   
 0.828
SOX18
SRY-box transcription factor 18.
   
  
 0.827
MMRN2
Multimerin 2.
   
  
 0.824
LRRC3C
Leucine rich repeat containing 3C.
   
 0.806
ENSCWAP00000004061
annotation not available
   
 0.806
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.