STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTOAOtoancorin. (1153 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.553
TNN
Tenascin N.
    
 0.541
TNR
Tenascin R.
    
 0.541
TNC
Tenascin C.
    
 0.541
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
   
  0.530
TONSL
Tonsoku like, DNA repair protein.
   
 0.501
FREM1
FRAS1 related extracellular matrix 1.
    
 0.499
ARID4A
AT-rich interaction domain 4A.
    
 0.495
ARID4B
AT-rich interaction domain 4B.
    
 0.495
RANBP2
RAN binding protein 2.
    
 0.478
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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