STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTOAOtoancorin. (1153 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.715
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
   
  0.647
ARID4A
AT-rich interaction domain 4A.
    
 0.642
ARID4B
AT-rich interaction domain 4B.
    
 0.642
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.609
BARD1
BRCA1 associated RING domain 1.
   
 0.605
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.599
MST1R
Macrophage stimulating 1 receptor.
    
 0.599
RIPK4
Receptor interacting serine/threonine kinase 4.
   
 0.596
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.587
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.