Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000002211annotation not available (429 aa)    
Predicted Functional Partners:
CRY1
Cryptochrome circadian regulator 1.
    
 0.987
CRY2
Cryptochrome circadian regulator 2.
    
 0.986
SKP1
S-phase kinase associated protein 1.
    
 0.982
CUL1
Cullin 1.
    
 0.978
RBX1
Ring-box 1.
    
 0.932
ENSCWAP00000003807
annotation not available
    
 0.893
FBXL3
F-box and leucine rich repeat protein 3.
     
  0.890
ENSCWAP00000001010
annotation not available
      
 0.806
CUL3
Cullin 3.
    
 0.799
PSMD6
Proteasome 26S subunit, non-ATPase 6.
     
 0.757
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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