Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PROB1Proline rich basic protein 1. (1017 aa)    
Predicted Functional Partners:
TNN
Tenascin N.
    
  0.730
TNR
Tenascin R.
    
  0.730
TNC
Tenascin C.
    
  0.730
PIWIL1
Piwi like RNA-mediated gene silencing 1.
   
    0.690
ENSCWAP00000027255
annotation not available
   
    0.690
DNAJC18
DnaJ heat shock protein family (Hsp40) member C18.
    
 
 0.614
SPATA24
Spermatogenesis associated 24.
      
 0.581
SMIM33
Small integral membrane protein 33.
      
 0.494
INCA1
Inhibitor of CDK, cyclin A1 interacting protein 1.
      
 0.487
DNAJC8
DnaJ heat shock protein family (Hsp40) member C8.
      
 0.487
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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