Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBRG4Transforming growth factor beta regulator 4. (632 aa)    
Predicted Functional Partners:
SLC49A3
Solute carrier family 49 member 3.
      
 0.831
FAM114A1
Family with sequence similarity 114 member A1.
    
   0.818
AP4E1
Adaptor related protein complex 4 subunit epsilon 1.
    
 0.809
AP4B1
Adaptor related protein complex 4 subunit beta 1.
   
 0.806
AP1G1
Adaptor related protein complex 1 subunit gamma 1.
    
 0.797
ENSCWAP00000023512
annotation not available
    
 0.797
PGAP3
post-GPI attachment to proteins phospholipase 3.
    
   0.788
CLTC
Clathrin heavy chain.
    
 0.787
TOMM40
Translocase of outer mitochondrial membrane 40.
   
   0.781
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
    
 
 0.779
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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