STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HECAHdc homolog, cell cycle regulator. (543 aa)    
Predicted Functional Partners:
SELL
Selectin L.
      
 0.821
SNX20
Sorting nexin 20.
      
 0.619
SYAP1
Synapse associated protein 1.
      
 0.612
ENSCWAP00000020100
annotation not available
   
  
 0.588
ENSCWAP00000020147
annotation not available
   
  
 0.588
MGAT5
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase.
      
 0.587
FUT1
Fucosyltransferase 1 (H blood group).
      
 0.585
OSGEP
O-sialoglycoprotein endopeptidase.
      
 0.584
ZMPSTE24
Zinc metallopeptidase STE24.
      
 0.568
LCN2
Lipocalin 2.
      
 0.534
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.