STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000002235annotation not available (169 aa)    
Predicted Functional Partners:
RPS17
Ribosomal protein S17.
   
 
 0.531
ENSCWAP00000007909
annotation not available
    
 0.525
MRPL16
Mitochondrial ribosomal protein L16.
    
   0.512
UGDH
UDP-glucose 6-dehydrogenase.
     
 0.507
RSC1A1
Regulator of solute carriers 1.
   
 
 0.504
GALC
Galactosylceramidase.
     
 0.503
UGCG
UDP-glucose ceramide glucosyltransferase.
     
 0.503
GUSB
Glucuronidase beta.
     
 0.502
FASN
Fatty acid synthase.
     
 0.502
SPOPL
Speckle type BTB/POZ protein like.
     
 0.496
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.