Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMBRD2LMBR1 domain containing 2. (695 aa)    
Predicted Functional Partners:
FRA10AC1
FRA10A associated CGG repeat 1.
      
 0.796
PITHD1
PITH domain containing 1.
      
 0.763
TMTC3
Transmembrane O-mannosyltransferase targeting cadherins 3.
   
  
 0.703
UBAC1
UBA domain containing 1.
      
 0.657
PIGO
Phosphatidylinositol glycan anchor biosynthesis class O.
      
 0.624
AP4E1
Adaptor related protein complex 4 subunit epsilon 1.
   
  
 0.614
CAPSL
Calcyphosine like.
 
    
 0.612
DNAJC22
DnaJ heat shock protein family (Hsp40) member C22.
      
 0.604
BICD1
BICD cargo adaptor 1.
      
 0.589
FAM214A
Family with sequence similarity 214 member A.
      
 0.589
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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