Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HS3ST2Heparan sulfate-glucosamine 3-sulfotransferase 2. (203 aa)    
Predicted Functional Partners:
SDC1
Syndecan 1.
     
 0.565
HS3ST5
Heparan sulfate-glucosamine 3-sulfotransferase 5.
     
 0.557
HS3ST1
Heparan sulfate-glucosamine 3-sulfotransferase 1.
     
 0.557
GPC6
Glypican 6.
     
 0.556
GPC4
Glypican 4.
     
 0.556
GPC2
Glypican 2.
     
 0.556
GPC1
Glypican 1.
     
 0.556
CSGALNACT2
Chondroitin sulfate N-acetylgalactosaminyltransferase 2.
      
 0.529
ZFP69B
ZFP69 zinc finger protein B.
      
 0.527
GPC5
Glypican 5.
     
 0.526
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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