STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SERPINH1Serpin family H member 1. (404 aa)    
Predicted Functional Partners:
OS9
OS9 endoplasmic reticulum lectin.
    
 
 0.950
COL4A2
Collagen type IV alpha 2 chain.
   
 0.924
COL4A6
Collagen type IV alpha 6 chain.
   
 0.924
SPARC
Secreted protein acidic and cysteine rich.
   
 
 0.897
NUDCD1
NudC domain containing 1.
    
   0.894
FAF2
Fas associated factor family member 2.
    
   0.885
PPIC
Peptidylprolyl isomerase C.
   
 
 0.876
MDH2
Malate dehydrogenase 2.
    
   0.871
ERLEC1
Endoplasmic reticulum lectin 1.
    
 
 0.840
COL1A2
Collagen type I alpha 2 chain.
   
 0.825
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.