STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHF1Pleckstrin homology and FYVE domain containing 1. (279 aa)    
Predicted Functional Partners:
SMDT1
Single-pass membrane protein with aspartate rich tail 1.
    
 0.670
MCU
Mitochondrial calcium uniporter.
    
 0.620
MCUB
Mitochondrial calcium uniporter dominant negative beta subunit.
    
 0.620
MICU1
Mitochondrial calcium uptake 1.
    
 0.606
MICU2
Mitochondrial calcium uptake 2.
    
 0.606
PRSS22
Serine protease 22.
      
 0.602
RBM6
RNA binding motif protein 6.
      
 0.602
RBM24
RNA binding motif protein 24.
      
 0.583
ZADH2
Zinc binding alcohol dehydrogenase domain containing 2.
      
 0.582
NDFIP2
Nedd4 family interacting protein 2.
    
 
 0.577
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.