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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POP4POP4 homolog, ribonuclease P/MRP subunit. (220 aa)    
Predicted Functional Partners:
RPP38
Ribonuclease P/MRP subunit p38.
   
 0.999
RPP21
Ribonuclease P/MRP subunit p21.
    
 0.999
RPP30
Ribonuclease P/MRP subunit p30.
   
 0.999
RPP25
Ribonuclease P and MRP subunit p25.
    
 0.999
RPP40
Ribonuclease P/MRP subunit p40.
    
 0.999
POP5
POP5 homolog, ribonuclease P/MRP subunit.
   
 0.999
POP1
POP1 homolog, ribonuclease P/MRP subunit.
   
 0.999
POP7
POP7 homolog, ribonuclease P/MRP subunit.
    
 0.999
RPP14
Ribonuclease P/MRP subunit p14.
    
 0.999
LAS1L
LAS1 like ribosome biogenesis factor.
   
 
  0.997
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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