STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TGFBITransforming growth factor beta induced. (766 aa)    
Predicted Functional Partners:
NDUFS2
NADH:ubiquinone oxidoreductase core subunit S2.
    
 
 0.759
NRN1
Neuritin 1.
      
 0.627
PDGFRA
Platelet derived growth factor receptor alpha.
      
 0.609
TGFB1
Transforming growth factor beta 1.
      
 0.604
NCF4
Neutrophil cytosolic factor 4.
   
  
 0.603
ANPEP
Alanyl aminopeptidase, membrane.
   
  
 0.601
CAPG
Capping actin protein, gelsolin like.
     
 0.599
PDGFRB
Platelet derived growth factor receptor beta.
   
  
 0.587
PIK3R1
Phosphoinositide-3-kinase regulatory subunit 1.
      
 0.582
GLI3
GLI family zinc finger 3.
      
 0.582
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.