Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VSTM2BV-set and transmembrane domain containing 2B. (289 aa)    
Predicted Functional Partners:
LMCD1
LIM and cysteine rich domains 1.
      
 0.699
DOC2B
Double C2 domain beta.
   
  
 0.696
WHRN
Whirlin.
      
 0.606
HPSE
Heparanase.
      
 0.585
CHODL
Chondrolectin.
      
 0.582
RPH3A
Rabphilin 3A.
   
  
 0.559
CRTAC1
Cartilage acidic protein 1.
   
  
 0.548
ARID5A
AT-rich interaction domain 5A.
      
 0.503
LENEP
Lens epithelial protein.
      
 0.488
TNFAIP8L3
TNF alpha induced protein 8 like 3.
      
 0.488
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (20%) [HD]