STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITM2BIntegral membrane protein 2B. (271 aa)    
Predicted Functional Partners:
APP
Amyloid beta precursor protein.
   
 0.938
TMEM59L
Transmembrane protein 59 like.
   
   0.795
TMEM59
Transmembrane protein 59.
   
 
 0.787
APLP2
Amyloid beta precursor like protein 2.
   
 0.782
UBB
Ubiquitin B.
   
 
 0.699
SCAMP1
Secretory carrier membrane protein 1.
    
 
 0.696
JUP
Junction plakoglobin.
   
 
 0.655
JAGN1
Jagunal homolog 1.
      
 0.652
GNB1L
G protein subunit beta 1 like.
      
 0.647
FNDC3A
Fibronectin type III domain containing 3A.
    
 
 0.632
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.