Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEP170Centrosomal protein 170. (1585 aa)    
Predicted Functional Partners:
CCDC68
Coiled-coil domain containing 68.
    
 0.987
WDR62
WD repeat domain 62.
    
 
 0.960
CCDC120
Coiled-coil domain containing 120.
    
 0.959
HERC2
HECT and RLD domain containing E3 ubiquitin protein ligase 2.
    
 
 0.935
NIN
Ninein.
    
 0.882
AKAP9
A-kinase anchoring protein 9.
    
 
 0.873
MAPKBP1
Mitogen-activated protein kinase binding protein 1.
    
 
 0.871
MAPT
Microtubule associated protein tau.
    
   0.871
ENSCWAP00000015279
annotation not available
    
 
 0.856
KIFC3
Kinesin family member C3.
    
 
 0.856
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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