STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDPRPyruvate dehydrogenase phosphatase regulatory subunit. (879 aa)    
Predicted Functional Partners:
GLDC
Glycine decarboxylase.
  
 0.979
GART
annotation not available
  
 
 0.946
PDP2
Pyruvate dehyrogenase phosphatase catalytic subunit 2.
  
 0.938
PDP1
Pyruvate dehyrogenase phosphatase catalytic subunit 1.
  
 0.937
ENSCWAP00000004425
annotation not available
  
 0.935
ENSCWAP00000005640
annotation not available
  
 0.935
ENSCWAP00000013939
annotation not available
  
 0.935
SHMT1
Serine hydroxymethyltransferase 1.
  
 0.927
SHMT2
Serine hydroxymethyltransferase 2.
  
 0.927
PIPOX
Pipecolic acid and sarcosine oxidase.
  
 0.924
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.