Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMIM33Small integral membrane protein 33. (132 aa)    
Predicted Functional Partners:
PKD2L2
Polycystin 2 like 2, transient receptor potential cation channel.
      
 0.576
SPATA24
Spermatogenesis associated 24.
      
 0.571
FAM13B
Family with sequence similarity 13 member B.
      
 0.519
PROB1
Proline rich basic protein 1.
      
 0.494
DNAJC18
DnaJ heat shock protein family (Hsp40) member C18.
      
 0.494
LRRTM2
Leucine rich repeat transmembrane neuronal 2.
      
 0.492
SIL1
SIL1 nucleotide exchange factor.
      
 0.450
GFRA3
GDNF family receptor alpha 3.
      
 0.446
ATP10A
ATPase phospholipid transporting 10A (putative).
      
 0.427
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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