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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCNN1GSodium channel epithelial 1 gamma subunit. (651 aa)    
Predicted Functional Partners:
SCNN1B
Sodium channel epithelial 1 beta subunit.
  
0.999
SCNN1A
Sodium channel epithelial 1 alpha subunit.
  
0.998
NEDD4L
NEDD4 like E3 ubiquitin protein ligase.
    
 0.978
SCN8A
Sodium voltage-gated channel alpha subunit 8.
     
 0.971
SCN5A
Sodium voltage-gated channel alpha subunit 5.
     
 0.970
SCN4A
Sodium voltage-gated channel alpha subunit 4.
     
 0.969
SCN10A
Sodium voltage-gated channel alpha subunit 10.
     
 0.968
SCN11A
Sodium voltage-gated channel alpha subunit 11.
     
 0.967
SCN3B
Sodium voltage-gated channel beta subunit 3.
     
 0.966
SCN7A
Sodium voltage-gated channel alpha subunit 7.
     
 0.961
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.