Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NIM1KNIM1 serine/threonine protein kinase. (436 aa)    
Predicted Functional Partners:
APPL1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
  0.883
APPL2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
    
  0.883
PCP4L1
Purkinje cell protein 4 like 1.
    
 
 0.787
ENSCWAP00000012931
annotation not available
    
 0.758
PRKAB1
Protein kinase AMP-activated non-catalytic subunit beta 1.
    
 0.712
PRKAB2
Protein kinase AMP-activated non-catalytic subunit beta 2.
    
 0.712
CRPPA
CDP-L-ribitol pyrophosphorylase A.
    
 0.698
CETN1
Centrin 1.
    
 0.698
CETN2
Centrin 2.
    
 0.698
CETN3
Centrin 3.
    
 0.698
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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