Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMOTL1Angiomotin like 1. (977 aa)    
Predicted Functional Partners:
NF2
Neurofibromin 2.
    
 0.996
AMOT
Angiomotin.
   
 
0.996
MPP5
Membrane palmitoylated protein 5.
    
 0.994
PATJ
PATJ crumbs cell polarity complex component.
    
 0.985
YAP1
Yes associated protein 1.
    
 0.975
WWTR1
WW domain containing transcription regulator 1.
    
 0.974
LATS1
Large tumor suppressor kinase 1.
    
 0.970
LATS2
Large tumor suppressor kinase 2.
    
 0.968
MPDZ
Multiple PDZ domain crumbs cell polarity complex component.
    
 0.968
ARHGAP17
Rho GTPase activating protein 17.
    
 0.955
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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