Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNX1Sorting nexin 1. (575 aa)    
Predicted Functional Partners:
SNX2
Sorting nexin 2.
  
0.999
VPS26A
VPS26, retromer complex component A.
   
 0.996
SNX5
Sorting nexin 5.
   
0.994
VPS35
VPS35 retromer complex component.
   
 0.993
VPS26B
VPS26, retromer complex component B.
   
 0.986
SNX6
Sorting nexin 6.
   
0.983
ENSCWAP00000013964
annotation not available
   
 0.978
ENSCWAP00000020836
annotation not available
   
 0.978
SNX32
Sorting nexin 32.
   
 0.970
SNX4
Sorting nexin 4.
   
 
 0.959
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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