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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THEGTheg spermatid protein. (376 aa)    
Predicted Functional Partners:
CNPY4
Canopy FGF signaling regulator 4.
      
 0.560
CCT5
Chaperonin containing TCP1 subunit 5.
    
 
 0.553
MGAM
Maltase-glucoamylase.
      
 0.489
TSSK1B
Testis specific serine kinase 1B.
      
 0.487
RSPH1
Radial spoke head component 1.
      
 0.487
PECAM1
Platelet and endothelial cell adhesion molecule 1.
  
     0.446
DNAJC28
DnaJ heat shock protein family (Hsp40) member C28.
      
 0.408
AS3MT
Arsenite methyltransferase.
      
 0.406
ATP7A
ATPase copper transporting alpha.
      
 0.403
ATP7B
ATPase copper transporting beta.
      
 0.403
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.