STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IFIH1Interferon induced with helicase C domain 1. (1023 aa)    
Predicted Functional Partners:
DHX58
DExH-box helicase 58.
   
 0.996
ISG15
ISG15 ubiquitin like modifier.
   
 0.992
RNF125
Ring finger protein 125.
    
 0.989
DDX58
DExD/H-box helicase 58.
   
 
 0.971
MAVS
Mitochondrial antiviral signaling protein.
    
 0.967
RSAD2
Radical S-adenosyl methionine domain containing 2.
   
  
 0.960
OASL
2'-5'-oligoadenylate synthetase like.
   
 0.956
EIF2AK2
Eukaryotic translation initiation factor 2 alpha kinase 2.
   
 0.952
ENSCWAP00000005934
annotation not available
   
  
 0.936
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.935
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.