Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM170AFamily with sequence similarity 170 member A. (334 aa)    
Predicted Functional Partners:
CSNK1A1
Casein kinase 1 alpha 1.
    
   0.893
SPC24
SPC24 component of NDC80 kinetochore complex.
    
   0.892
VAPA
VAMP associated protein A.
    
   0.878
SPC25
SPC25 component of NDC80 kinetochore complex.
    
   0.845
ZNF358
Zinc finger protein 358.
    
   0.816
USP7
Ubiquitin specific peptidase 7.
    
   0.770
ENSCWAP00000001804
annotation not available
    
   0.668
ENSCWAP00000015267
annotation not available
    
   0.668
ENSCWAP00000028616
annotation not available
   
  
 0.621
SPEM1
Spermatid maturation 1.
   
  
 0.617
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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