STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GCAGrancalcin. (221 aa)    
Predicted Functional Partners:
SRI
Sorcin.
    
   0.779
NUDCD1
NudC domain containing 1.
    
   0.766
CAST
Calpastatin.
   
 0.741
KCNH7
Potassium voltage-gated channel subfamily H member 7.
      
 0.657
CAPN2
Calpain 2.
    
 0.638
ENSCWAP00000000384
annotation not available
    
 0.638
ADGB
Androglobin.
    
 0.638
CAPN5
Calpain 5.
    
 0.638
CAPN3
Calpain 3.
    
 0.638
ENSCWAP00000010523
annotation not available
    
 0.638
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.