STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX22Sorting nexin 22. (193 aa)    
Predicted Functional Partners:
SNX24
Sorting nexin 24.
    
   0.948
SPATA46
Spermatogenesis associated 46.
    
   0.860
FGFR1
Fibroblast growth factor receptor 1.
    
   0.784
FGFR2
Fibroblast growth factor receptor 2.
    
   0.784
CYB561D1
Cytochrome b561 family member D1.
      
 0.717
GAPVD1
GTPase activating protein and VPS9 domains 1.
    
 
 0.660
SNX10
Sorting nexin 10.
     
 0.657
PTTG1IP
PTTG1 interacting protein.
      
 0.629
NUDT17
Nudix hydrolase 17.
      
 0.616
FNBP1
Formin binding protein 1.
    
 
 0.602
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.