STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1orf100Chromosome 1 open reading frame 100. (144 aa)    
Predicted Functional Partners:
CFAP45
Cilia and flagella associated protein 45.
    
 
 0.892
C7orf31
Chromosome 7 open reading frame 31.
    
   0.874
C11orf1
Chromosome 11 open reading frame 1.
    
   0.874
ENSCWAP00000006092
annotation not available
    
   0.874
ENSCWAP00000009050
annotation not available
    
   0.828
ENSCWAP00000009118
annotation not available
    
   0.828
ENSCWAP00000022951
annotation not available
    
   0.815
ENSCWAP00000023002
annotation not available
    
   0.815
TEPP
Testis, prostate and placenta expressed.
   
   0.808
C9orf135
Chromosome 9 open reading frame 135.
   
   0.808
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.