STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRR16Proline rich 16. (304 aa)    
Predicted Functional Partners:
PRR12
Proline rich 12.
      
 0.662
ZFHX4
Zinc finger homeobox 4.
      
 0.634
VPS13D
Vacuolar protein sorting 13 homolog D.
      
 0.632
MORN5
MORN repeat containing 5.
      
 0.615
DPH5
Diphthamide biosynthesis 5.
      
 0.607
MTMR12
Myotubularin related protein 12.
      
 0.605
TMEM154
Transmembrane protein 154.
      
 0.596
PHOX2A
Paired like homeobox 2A.
      
 0.585
FAM170A
Family with sequence similarity 170 member A.
      
 0.583
CACHD1
Cache domain containing 1.
      
 0.583
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.