Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPIBPeptidylprolyl isomerase B. (216 aa)    
Predicted Functional Partners:
P3H1
Prolyl 3-hydroxylase 1.
    
 0.990
P3H4
Prolyl 3-hydroxylase family member 4 (inactive).
   
 0.975
CRTAP
Cartilage associated protein.
   
 0.975
HSP90B1
Heat shock protein 90 beta family member 1.
   
 0.972
PDIA4
Protein disulfide isomerase family A member 4.
   
 0.969
PDIA3
Protein disulfide isomerase family A member 3.
   
 0.968
P4HB
Prolyl 4-hydroxylase subunit beta.
   
 0.953
HSPA5
Heat shock protein family A (Hsp70) member 5.
   
 0.948
MECP2
methyl-CpG binding protein 2.
    
   0.940
MAPT
Microtubule associated protein tau.
    
   0.922
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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