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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPIBPeptidylprolyl isomerase B. (216 aa)    
Predicted Functional Partners:
CRTAP
Cartilage associated protein.
   
 0.986
P3H1
Prolyl 3-hydroxylase 1.
   
 0.984
HSPA5
Heat shock protein family A (Hsp70) member 5.
 
 
 0.975
P4HB
Prolyl 4-hydroxylase subunit beta.
   
 0.968
WDR36
WD repeat domain 36.
   
 0.956
DNAJC10
DnaJ heat shock protein family (Hsp40) member C10.
   
 0.949
ENSCWAP00000028571
annotation not available
   
 0.949
UTP4
UTP4 small subunit processome component.
   
 0.948
UTP15
UTP15 small subunit processome component.
   
 0.947
HSP90B1
Heat shock protein 90 beta family member 1.
   
 0.947
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.