Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAD17RAD17 checkpoint clamp loader component. (682 aa)    
Predicted Functional Partners:
RFC2
Replication factor C subunit 2.
    
 0.999
RFC3
Replication factor C subunit 3.
   
 0.998
RFC4
Replication factor C subunit 4.
    
 0.998
RFC5
Replication factor C subunit 5.
    
 0.997
ENSCWAP00000001546
annotation not available
   
 0.996
RAD9A
RAD9 checkpoint clamp component A.
   
 0.996
ATR
ATR serine/threonine kinase.
    
 0.996
RAD1
RAD1 checkpoint DNA exonuclease.
   
 0.995
WRN
WRN RecQ like helicase.
   
 0.985
TOPBP1
DNA topoisomerase II binding protein 1.
    
 0.984
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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