Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TPM3Tropomyosin 3. (285 aa)    
Predicted Functional Partners:
TNNI3
Troponin I3, cardiac type.
   
 0.955
TNNI1
Troponin I1, slow skeletal type.
   
 0.916
TNNT2
Troponin T2, cardiac type.
   
 0.895
MYL1
Myosin light chain 1.
   
 0.895
TNNT1
Troponin T1, slow skeletal type.
   
 0.895
TNNI2
Troponin I2, fast skeletal type.
   
 0.885
TNNT3
Troponin T3, fast skeletal type.
   
 0.872
TFG
Trafficking from ER to golgi regulator.
   
 0.854
SMIM20
Small integral membrane protein 20.
   
 0.844
NTRK1
Neurotrophic receptor tyrosine kinase 1.
    
 0.839
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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